function cmap=may2011_fireprint(n,varargin)
%MAY2011_FIREPRINT Colormap that increases linearly in lightness (with colors)
%
% Usage:
% cmap = may2011_fireprint(n)
%
% Input parameters:
% n : The number of elements (256)
%
% Further on, the following options can be applied:
%
% 'minColor' The absolute minimum value can have a different color
% ('none'), 'white','black','lightgray', 'darkgray'
% or any RGB value ex: [0 1 0]
%
% 'maxColor' The absolute maximum value can have a different color
%
% 'invert' (0), 1=invert the whole colormap
%
%
% Colormap that increases linearly in lightness (such as a pure black to white
% map) but incorporates additional colors that help to emphasize the
% transitions and hence enhance the perception of the data.
% This colormap is designed to be printer-friendly both for color printers as
% as well as B&W printers.
% Credit: The idea of the passages over blue&red stems from ImageJ's LUT 'Fire'
% Our colormap corrects the color-printout-problems as well as the
% non-linearity in the fire-colormap which would make it incompatible
% with a B&W printing.
%
% Examples:
%
% figure; imagesc(peaks(200));
% colormap(fireprint)
% colorbar
%
% figure; imagesc(peaks(200));
% colormap(fireprint(256,'minColor','black','maxColor',[0 1 0]))
% colorbar
%
% figure; imagesc(peaks(200));
% colormap(fireprint(256,'invert',1,'minColor','darkgray'))
% colorbar
%
% Url: http://amtoolbox.org/amt-1.6.0/doc/modelstages/may2011_fireprint.php
% #StatusDoc: Good
% #StatusCode: Good
% #Verification: Unknown
% #Requirements: MATLAB M-Signal
% #Author: Matthias Geissbuehler (2011)
% #Author: Stefan Geissbuehler (2011)
% #Author: Tobias May (2014)
% This file is licensed unter the GNU General Public License (GPL) either
% version 3 of the license, or any later version as published by the Free Software
% Foundation. Details of the GPLv3 can be found in the AMT directory "licences" and
% at <https://www.gnu.org/licenses/gpl-3.0.html>.
% You can redistribute this file and/or modify it under the terms of the GPLv3.
% This file is distributed without any warranty; without even the implied warranty
% of merchantability or fitness for a particular purpose.
p=inputParser;
p.addParamValue('minColor','none');
p.addParamValue('maxColor','none');
p.addParamValue('invert',0, @(x)x==0 || x==1);
if nargin==1
p.addRequired('n', @(x)x>0 && mod(x,1)==0);
p.parse(n);
elseif nargin>1
p.addRequired('n', @(x)x>0 && mod(x,1)==0);
p.parse(n, varargin{:});
else
p.addParamValue('n',256, @(x)x>0 && mod(x,1)==0);
p.parse();
end
config = p.Results;
n=config.n;
%the ControlPoints
cP(:,1) = [0 0 0];
cP(:,2) = [0 0.6268 0.8926]; %cyan
cP(:,3) = [0.8408 0.1233 0.4041]; %redish-magenta
cP(:,4) = [1 0.9309 0]; %yellow
cP(:,5) = [1 1 1];
cmap = abs(interp1((1:5),double(cP'),linspace(1,5,n))); % for non-iso points, a normal interpolation gives better results
checkIfAnyAbove1 = 1;
while checkIfAnyAbove1
% Normalize the shades in order to be compatible with a B&W printout
cmap(:,1)=cmap(:,1)./sqrt(sum(cmap.^2,2)).*linspace(0,max(sqrt(sum(cmap.^2,2))),n)';
cmap(:,2)=cmap(:,2)./sqrt(sum(cmap.^2,2)).*linspace(0,max(sqrt(sum(cmap.^2,2))),n)';
cmap(:,3)=cmap(:,3)./sqrt(sum(cmap.^2,2)).*linspace(0,max(sqrt(sum(cmap.^2,2))),n)';
cmap(isnan(cmap))=0;
% check if during normalization any value is now bigger than 1
above1 = cmap>1;
if sum(above1(:))
if sum(above1(:,1)) % any R>1 ?
myIndexes = find(above1(:,1));
cmap(myIndexes,1) = 1;
cmap(myIndexes,2) = 0.05 .* (1-cmap(myIndexes,2)) + cmap(myIndexes,2); % add a little bit to other values
cmap(myIndexes,3) = 0.05 .* (1-cmap(myIndexes,3)) + cmap(myIndexes,3); % add a little bit to other values
end
if sum(above1(:,2)) % any G>1 ?
myIndexes = find(above1(:,2));
cmap(myIndexes,2) = 1;
cmap(myIndexes,1) = 0.05 .* (1-cmap(myIndexes,1)) + cmap(myIndexes,1); % add a little bit to other values
cmap(myIndexes,3) = 0.05 .* (1-cmap(myIndexes,3)) + cmap(myIndexes,3); % add a little bit to other values
end
if sum(above1(:,3)) % any B>1 ?
myIndexes = find(above1(:,3));
cmap(myIndexes,3) = 1;
cmap(myIndexes,1) = 0.05 .* (1-cmap(myIndexes,1)) + cmap(myIndexes,1); % add a little bit to other values
cmap(myIndexes,2) = 0.05 .* (1-cmap(myIndexes,2)) + cmap(myIndexes,2); % add a little bit to other values
end
checkIfAnyAbove1 = 1;
else
checkIfAnyAbove1 = 0;
end
end
if config.invert
cmap = flipud(cmap);
end
if ischar(config.minColor)
if ~strcmp(config.minColor,'none')
switch config.minColor
case 'white'
cmap(1,:) = [1 1 1];
case 'black'
cmap(1,:) = [0 0 0];
case 'lightgray'
cmap(1,:) = [0.8 0.8 0.8];
case 'darkgray'
cmap(1,:) = [0.2 0.2 0.2];
end
end
else
cmap(1,:) = config.minColor;
end
if ischar(config.maxColor)
if ~strcmp(config.maxColor,'none')
switch config.maxColor
case 'white'
cmap(end,:) = [1 1 1];
case 'black'
cmap(end,:) = [0 0 0];
case 'lightgray'
cmap(end,:) = [0.8 0.8 0.8];
case 'darkgray'
cmap(end,:) = [0.2 0.2 0.2];
end
end
else
cmap(end,:) = config.maxColor;
end